PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02829.1.g00100.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 304aa    MW: 31720.2 Da    PI: 8.6333
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02829.1.g00100.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.81.2e-12132175955
                           AP2   9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++grW++eIr p++   r++ ++g+f t+eeAa a++aa  +++g
  Zpz_sc02829.1.g00100.1.am.mk 132 RRRQGRWASEIRMPRT---RAKLWIGTFATPEEAALAYDAAVFCFYG 175
                                   678**********965...4*********************999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.372124187IPR001471AP2/ERF domain
CDDcd000184.39E-20130189No hitNo description
SuperFamilySSF541711.05E-12132187IPR016177DNA-binding domain
PfamPF008473.6E-7132175IPR001471AP2/ERF domain
SMARTSM003805.9E-18132193IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-19132188IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MRRLAPPPQY HALSSHLSAS GEIFATASPS TTPLCCLPLP PFKLSPLASS PLHSHTASLS  60
SFDLLIVRGS CLVPFLLVAS VVSMAGAAAS RATGVAGMGN GRSTAPQGNN NGALSGAGGG  120
GGPKNLGWLG ARRRQGRWAS EIRMPRTRAK LWIGTFATPE EAALAYDAAV FCFYGARVPD  180
SRRLNFPTAP RPNISENMRV RLTVSNIKAI AEHYARTLAV YLVPPPPPVL LPVPAPAPAV  240
PAPMMVNEAP VEATAASAAG AASATTNHGN VNAMDGDSAA ATVEDYFLNF NPEEFDFDHL  300
MADI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002444750.15e-38hypothetical protein SORBIDRAFT_07g027250
TrEMBLC5YIM25e-38C5YIM2_SORBI; Putative uncharacterized protein Sb07g027250
STRINGSb07g027250.11e-37(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.12e-17ERF family protein